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Table 2 TCR ß chain sequences of joint-specific clonotypes

From: Multiple Mechanisms Support Oligoclonal T Cell Expansion in Rheumatoid Synovitis

Patient

BV

N-D-N

BJ

 

IL-2R

IL-2R+

DMP

3

CASS

FVL

NEQFF

2S1

+

+

 

5S1

CASS

LGGG

STNEQFF

2S1

+

+

 

14

CASS

PISGK

ETQYF

2S5

+

+

EK1

5S1

CASS

LDSGGGVLT

SYEQYF

2S7

+

 

8

CASS

LVWH S GD

NYGYTF

1S2

+

 

14

CAS

GL

TEAFF

1S1

+

+

 

17

CASS

T AGR

SDTQYF

2S3

+

EK2

3

CASS

QGQGRPF

NTEAFF

1S1

+

 

3

CAS

SLRSSRRGSIGG

NEQFF

2S1

+

 

5S1

CASS

GGQGTLPN

EQYF

2S7

+

+

 

5S1

CASS

LDAR

NEQFF

2S1

+

 

5S1

CASS

LV

QETQYF

2S5

+

 

8

CASS

LAVQGTR

YGYTF

1S2

+

 

8

CASS

FNALTGGR

ETQYF

2S5

+

 

14

CASS

CSV

NTEAFF

1S1

+

+

 

14

CAS

SYSA

NYGYTF

1S2

+

+

 

17

CASS

R G G

GYTF

1S2

+

JAB

3

CASS

LAGV

STNEQFF

2S1

+

JE

3

CAS

SLAG

STNEQFF

2S1

+

+

 

3

CASS

LLGR

NTEAFF

1S1

+

 

3

CAS

SSSGTGA

YEQYF

2S7

+

 

5S1

CASS

SYDETGTGGLP

YEQYF

2S7

+

 

8

CASS

LVEG

TEAFF

1S1

+

+

 

8

CASS

LDLRQGEW

ETQYF

2S5

+

+

 

8

CASS

TN

YEQYF

2S7

+

+

 

8

CASS

SLTGM

NTEAFF

1S1

+

 

8

CASS

MLVRRG

NYGYTF

1S2

+

 

14

CASS

LRGRT

DTQYF

2S3

+

 

14

CASS

LTGK

TQYF

2S5

+

LT

3

CAS

SLGGNS

NTEAFF

1S1

+

+

 

3

CAS

RNPAGSRVG

SYEQYF

2S7

+

+

 

3

CASS

LL

DTQYF

2S3

+

 

3

CASS

LRE

TQYF

2S5

+

 

3

CAS

CFGGNS

NTEAFF

1S1

+

 

3

CAS

SAGQAPFL

YGYTF

1S2

+

 

3

CASS

NHNPLGVLG

TDTQYF

2S3

+

 

14

CASS

PHLLGS

YEQYF

2S7

+

 

17

CASS

ALVPGQGPVG

NEQFF

2S1

+

+

 

17

CASS

HGGLAGI

ETQYF

2S5

+

RC

3

CASS

SGTSG

EQFF

2S1

+

 

3

CASS

LGDRG

TDTQYF

2S3

+

 

3

CASS

IRDRGAQYH

YEQYF

2S7

+

 

5S1

CASS

SLGRV

NTEAFF

1S1

+

 

5S1

CASS

PLEGR

SYEQYF

2S7

+

 

8

CASS

CTHG

TEAFF

1S1

+

 

14

CASS

SRQD

STDTQYF

2S3

+

 

14

CASS

RTGG

YEQYF

2S7

+

RL

3

CAS

SFRTG

TQYF

2S5

+

+

 

5S1

CASS

LDGA

YGYTF

1S2

+

+

 

5S1

CASS

PGGGVH

TDTQYF

2S3

+

 

5S1

CASS

LGR

ETQYF

2S5

+

 

5S1

CAS

RDRQGIL

SYEQYF

2S7

+

 

8

CASS

LSGV

YGYTF

1S2

+

+

 

8

CASS

LYAGA

EAFF

1S1

+

+

 

8

CASS

FRRN

NEQFF

2S1

+

 

8

CASS

PGQ

SYEQYF

2S7

+

 

14

CASS

FVCV

NYGYTF

1S2

+

 

17

CASS

NGE

TDTQYF

2S3

+

 

17

CASS

TVL

SYEQYF

2S7

+

 

17

CA

FRARGN

TDTQYF

2S3

+