From: The association of CASC16 variants with breast Cancer risk in a northwest Chinese female population
SNP ID | Model | Genotype | Case N (%) | Control N (%) | OR (95% CI) | pa |
---|---|---|---|---|---|---|
rs3803662 | ||||||
Codominant | A/A | 318 (46.70) | 310 (45.66) | 1 | ||
A/G | 308 (45.23) | 292 (43.00) | 1.03 (0.82–1.29) | 0.805 | ||
G/G | 55 (8.08) | 77 (11.34) | 0.70 (0.48–1.02) | 0.061 | ||
Dominant | A/A | 318 (46.70) | 310 (45.66) | 1 | ||
A/G-G/G | 363 (53.30) | 369 (54.34) | 0.96 (0.77–1.18) | 0.700 | ||
Recessive | A/A-A/G | 626 (91.92) | 602 (88.66) | 1 | ||
G/G | 55 (8.08) | 77 (11.34) | 0.69 (0.48–0.99) | 0.042 | ||
Log-additive | – | – | – | 0.90 (0.77–1.06) | 0.223 | |
rs4784227 | ||||||
Codominant | C/C | 353 (52.30) | 394 (58.37) | 1 | ||
T/C | 270 (40.00) | 240 (35.56) | 1.26 (1.00–1.57) | 0.048 | ||
T/T | 52 (7.70) | 41 (6.07) | 1.42 (0.92–2.18) | 0.117 | ||
Dominant | C/C | 353 (52.30) | 394 (58.37) | 1 | ||
T/C-T/T | 322 (47.70) | 281 (41.63) | 1.28 (1.03–1.59) | 0.025 | ||
Recessive | C/C-T/C | 623 (92.30) | 634 (93.93) | 1 | ||
T/T | 52 (7.70) | 41 (6.07) | 1.29 (0.84–1.97) | 0.239 | ||
Log-additive | – | – | – | 1.22 (1.03–1.45) | 0.023 | |
rs45544231 | ||||||
Codominant | G/G | 445 (65.35) | 446 (65.59) | 1 | ||
G/C | 204 (29.96) | 205 (30.15) | 0.99 (0.79–1.26) | 0.980 | ||
C/C | 32 (4.70) | 29 (4.26) | 1.11 (0.66–1.86) | 0.707 | ||
Dominant | G/G | 445 (65.35) | 446 (65.59) | 1 | ||
G/C-C/C | 236 (34.65) | 234 (34.41) | 1.01 (0.81–1.26) | 0.928 | ||
Recessive | G/G-G/C | 649 (95.30) | 651 (95.74) | 1 | ||
C/C | 32 (4.70) | 29 (4.26) | 1.11 (0.66–1.85) | 0.701 | ||
Log-additive | – | – | – | 1.02 (0.85–1.23) | 0.831 | |
rs12922061 | ||||||
Codominant | C/C | 348 (51.10) | 381 (56.03) | 1 | ||
C/T | 278 (40.82) | 262 (38.53) | 1.16 (0.93–1.45) | 0.187 | ||
T/T | 55 (8.08) | 37 (5.44) | 1.63 (1.05–2.53) | 0.030 | ||
Dominant | C/C | 348 (51.10) | 381 (56.03) | 1 | ||
C/T-T/T | 333 (48.90) | 299 (43.97) | 1.22 (0.99–1.51) | 0.068 | ||
Recessive | C/C-C/T | 626 (91.92) | 643 (94.56) | 1 | ||
T/T | 55 (8.08) | 37 (5.44) | 1.53 (0.99–2.35) | 0.054 | ||
Log-additive | – | – | – | 1.22 (1.03–1.45) | 0.025 | |
rs3112612 | ||||||
Codominant | A/A | 444 (65.29) | 446 (65.59) | 1 | ||
A/G | 204 (30.00) | 203 (29.85) | 1.01 (0.80–1.28) | 0.938 | ||
G/G | 32 (4.71) | 31 (4.56) | 1.04 (0.62–1.73) | 0.891 | ||
Dominant | A/A | 444 (65.29) | 446 (65.59) | 1 | ||
A/G-G/G | 236 (34.71) | 234 (34.41) | 1.01 (0.81–1.27) | 0.911 | ||
Recessive | A/A-A/G | 648 (95.29) | 649 (95.44) | 1 | ||
G/G | 32 (4.71) | 31 (4.56) | 1.03 (0.62–1.72) | 0.899 | ||
Log-additive | – | – | – | 1.01 (0.84–1.22) | 0.889 |