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Table 2 The selected features based on the criteria* in the train sets of WB and NP samples

From: Identifying novel host-based diagnostic biomarker panels for COVID-19: a whole-blood/nasopharyngeal transcriptome meta-analysis

NP

WB

Gene

L.Coef

Abs.L.Coef

logFC

Abs.logFC

Gene

L.Coef

Abs.L.Coef

logFC

Abs.logFC

IFI6

− 0.28491

0.284913

1.613021

1.613021

SLC24A5

− 1.00469

1.004693

− 2.03768

2.037676

IFI44L

− 0.27956

0.279561

1.970857

1.970857

SLC45A2

0.706125

0.706125

1.208076

1.208076

SIGLEC1

− 0.27801

0.278012

1.332828

1.332828

C1QC

0.416476

0.416476

1.196718

1.196718

NUCB1

0.226323

0.226323

− 1.00591

1.005905

NMNAT2

0.403256

0.403256

1.065142

1.065142

XAF1

− 0.21556

0.215562

1.081608

1.081608

LGSN

0.313768

0.313768

1.034986

1.034986

TMED9

0.201803

0.201803

− 1.50563

1.505627

HIST2H4A

0.306524

0.306524

2.531967

2.531967

SAMHD1

0.168243

0.168243

− 1.00134

1.001343

INSC

0.300362

0.300362

1.489929

1.489929

SDC1

− 0.15729

0.157293

− 1.00398

1.003981

GOLGA8M

0.288115

0.288115

1.033698

1.033698

TIMM13

0.154103

0.154103

− 1.1873

1.187303

CDCA5

0.209252

0.209252

1.05616

1.05616

IL1R2

0.14483

0.14483

− 1.37001

1.370005

NOS1AP

0.194112

0.194112

1.137223

1.137223

CXCL11

0.122537

0.122537

1.340965

1.340965

BEGAIN

0.190819

0.190819

1.167257

1.167257

LAMB3

0.092874

0.092874

− 1.46286

1.462858

OTOF

0.171533

0.171533

1.280815

1.280815

TMA7

0.081283

0.081283

− 1.315

1.314995

UGT2B11

− 0.15846

0.158463

− 1.48498

1.484976

ADIRF

0.069208

0.069208

− 1.30839

1.308395

GSTM1

− 0.15549

0.155486

− 1.43369

1.433691

BBS10

0.05455

0.05455

− 1.40761

1.407608

OR10G2

− 0.13769

0.137689

− 1.95528

1.95528

OR1I1

0.050515

0.050515

− 1.4272

1.427201

TRIP13

0.115733

0.115733

1.028476

1.028476

MIF

0.031292

0.031292

− 1.80266

1.802656

CCDC27

− 0.10699

0.106987

− 1.99933

1.999328

CXCL10

0.029183

0.029183

1.5632

1.5632

ABCC11

0.08954

0.08954

1.31761

1.31761

C19orf33

0.015395

0.015395

− 1.33282

1.33282

EIF1AY

− 0.08357

0.083573

− 1.76969

1.769694

COPA

0.014771

0.014771

− 1.31686

1.316856

OR2A42

− 0.0225

0.022504

− 2.24545

2.245455

ADAM17

0.012107

0.012107

− 1.36326

1.363259

GTF2H2C

0.01273

0.01273

1.429336

1.429336

TCTEX1D4

0.006927

0.006927

− 1.52527

1.52527

SCN5A

0.007577

0.007577

1.405947

1.405947

IFIT2

0.005005

0.005005

1.308344

1.308344

     
  1. WB whole blood, NP nasopharyngeal
  2. *Absolute LASSO coefficient more than 0.1 OR the non-zero LASSO coefficient and the absolute value of logFC more than 1.3