Skip to main content

Table 1 Allele frequencies

From: Analysis of TBX1 Variation in Patients with Psychotic and Affective Disorders

  

All affecteds

Schizophrenia + schizoaffective

 

Alleles

          
 

(major/

 

Frequency

Frequency

   

Frequency

Frequency

  

SNP ID

minor)

Allele

cases

controls

χ2

P

Allele

cases

controls

χ2

P

   

n = 446

n = 436

   

n = 293

n = 436

  

rs2871042

A/G

A

0.53

0.53

0.002

0.963

A

0.54

0.53

0.039

0.843

rs885988

A/G

G

0.48

0.48

0.002

0.968

G

0.49

0.48

0.032

0.859

rs747226

G/A

G

0.62

0.60

1.025

0.311

G

0.63

0.60

0.919

0.338

rs739374

C/T

T

0.28

0.26

1.658

0.198

T

0.28

0.26

0.955

0.328

v14186

C/T

T

0.37

0.33

2.421

0.120

T

0.37

0.33

1.950

0.163

rs737868

C/G

C

0.71

0.67

2.682

0.102

C

0.72

0.67

3.546

0.060

rs2301558

C/T

C

0.72

0.71

0.170

0.680

C

0.71

0.71

0.002

0.961

rs2238777

A/G

G

0.54

0.52

1.165

0.280

G

0.55

0.52

1.401

0.237

rs5746826

G/T

T

0.54

0.51

1.238

0.266

T

0.55

0.51

1.768

0.184

  

Schizophrenia

Affective disorder (BP + MDD)

 

Alleles

          
 

(major/

 

Frequency

Frequency

   

Frequency

Frequency

  

SNP ID

minor)

Allele

cases

controls

χ2

P

Allele

cases

controls

χ2

P

   

n = 226

n = 436

   

n = 111

n = 436

  

rs2871042

A/G

G

0.48

0.47

0.114

0.735

A

0.54

0.53

0.033

0.856

rs885988

A/G

G

0.49

0.48

0.125

0.723

A

0.52

0.48

0.001

0.971

rs747226

G/A

G

0.62

0.60

0.510

0.475

G

0.62

0.60

0.191

0.662

rs739374

C/T

T

0.29

0.26

1.694

0.193

T

0.31

0.26

2.490

0.115

v14186

C/T

T

0.36

0.33

1.080

0.299

T

0.34

0.33

0.080

0.777

rs737868

C/G

C

0.76

0.67

2.561

0.110

C

0.68

0.67

0.074

0.785

rs2301558

C/T

T

0.29

0.29

0.046

0.830

C

0.76

0.71

1.676

0.195

rs2238777

A/G

G

0.55

0.52

1.379

0.240

G

0.53

0.52

0.198

0.657

rs5746826

G/T

T

0.55

0.51

1.676

0.196

G

0.49

0.51

0.005

0.943