From: Analysis of TBX1 Variation in Patients with Psychotic and Affective Disorders
 |  | All affecteds | Schizophrenia + schizoaffective | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
 | Alleles |  |  |  |  |  |  |  |  |  |  |
 | (major/ |  | Frequency | Frequency |  |  |  | Frequency | Frequency |  |  |
SNP ID | minor) | Allele | cases | controls | χ2 | P | Allele | cases | controls | χ2 | P |
 |  |  | n = 446 | n = 436 |  |  |  | n = 293 | n = 436 |  |  |
rs2871042 | A/G | A | 0.53 | 0.53 | 0.002 | 0.963 | A | 0.54 | 0.53 | 0.039 | 0.843 |
rs885988 | A/G | G | 0.48 | 0.48 | 0.002 | 0.968 | G | 0.49 | 0.48 | 0.032 | 0.859 |
rs747226 | G/A | G | 0.62 | 0.60 | 1.025 | 0.311 | G | 0.63 | 0.60 | 0.919 | 0.338 |
rs739374 | C/T | T | 0.28 | 0.26 | 1.658 | 0.198 | T | 0.28 | 0.26 | 0.955 | 0.328 |
v14186 | C/T | T | 0.37 | 0.33 | 2.421 | 0.120 | T | 0.37 | 0.33 | 1.950 | 0.163 |
rs737868 | C/G | C | 0.71 | 0.67 | 2.682 | 0.102 | C | 0.72 | 0.67 | 3.546 | 0.060 |
rs2301558 | C/T | C | 0.72 | 0.71 | 0.170 | 0.680 | C | 0.71 | 0.71 | 0.002 | 0.961 |
rs2238777 | A/G | G | 0.54 | 0.52 | 1.165 | 0.280 | G | 0.55 | 0.52 | 1.401 | 0.237 |
rs5746826 | G/T | T | 0.54 | 0.51 | 1.238 | 0.266 | T | 0.55 | 0.51 | 1.768 | 0.184 |
 |  | Schizophrenia | Affective disorder (BP + MDD) | ||||||||
 | Alleles |  |  |  |  |  |  |  |  |  |  |
 | (major/ |  | Frequency | Frequency |  |  |  | Frequency | Frequency |  |  |
SNP ID | minor) | Allele | cases | controls | χ2 | P | Allele | cases | controls | χ2 | P |
 |  |  | n = 226 | n = 436 |  |  |  | n = 111 | n = 436 |  |  |
rs2871042 | A/G | G | 0.48 | 0.47 | 0.114 | 0.735 | A | 0.54 | 0.53 | 0.033 | 0.856 |
rs885988 | A/G | G | 0.49 | 0.48 | 0.125 | 0.723 | A | 0.52 | 0.48 | 0.001 | 0.971 |
rs747226 | G/A | G | 0.62 | 0.60 | 0.510 | 0.475 | G | 0.62 | 0.60 | 0.191 | 0.662 |
rs739374 | C/T | T | 0.29 | 0.26 | 1.694 | 0.193 | T | 0.31 | 0.26 | 2.490 | 0.115 |
v14186 | C/T | T | 0.36 | 0.33 | 1.080 | 0.299 | T | 0.34 | 0.33 | 0.080 | 0.777 |
rs737868 | C/G | C | 0.76 | 0.67 | 2.561 | 0.110 | C | 0.68 | 0.67 | 0.074 | 0.785 |
rs2301558 | C/T | T | 0.29 | 0.29 | 0.046 | 0.830 | C | 0.76 | 0.71 | 1.676 | 0.195 |
rs2238777 | A/G | G | 0.55 | 0.52 | 1.379 | 0.240 | G | 0.53 | 0.52 | 0.198 | 0.657 |
rs5746826 | G/T | T | 0.55 | 0.51 | 1.676 | 0.196 | G | 0.49 | 0.51 | 0.005 | 0.943 |