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Table 1 Oligonucleotide primer sequences used

From: Gene Expression Profiling of the Hedgehog Signaling Pathway in Human Meningiomas

Gene

Primer forward

Primer reverse

IHH

5′ AGG CCG GCT TTG ACT GGG TGT ATT 3′

5′ GCG GCC GAG TGC TCG GAC TT 3′

SHH

5′ CCG GCT TCG ACT GGG TGT ACT A 3′

5′ CGC CAC CGA GTT CTC TGC TTT 3′

DHH

5′ CCG GCT TCG ACT GGG TCT ACT AC 3′

5′ GAC CGC CAG TGA GTT ATC AGC TTT 3′

HHAT

5′ CCT GGA TGC TGG CCT ATG TCT T 3′

5′ GCT CCT GCT GCT GCA TCT GTT 3′

DISP1

5′ ACT TCT CTG ATC CAT TGC TGG GTT 3′

5′ GAC CAA TCT CTG GCC TAT TGC TGT 3′

DISP2

5′ TGT GCA GCA CCA TGT GGT CA 3′

5′ AGC AAT CAG CTG GGA ATA GCT CTT 3′

PTCH1

5′ CCC CTG TAC GAA GTG GAC ACT CTC 3′

5′ AAG GAA GAT CAC CAC TAC CTT GGC T 3′

PTCH2

5′ GAT GGG GCC ATC TCC ACA TT 3′

5′ CGC CGC AAA GAA GTA CCT TAC A 3′

SMO

5′ GCT ACT TCC TCA TCC GAG GAG TCA 3′

5′ GGC GCA GCA TGG TCT CGT T 3′

HHIP

5′ GGG CGC CTG GAG AAT AAG ATA TTT 3′

5′GTGGAGAGCAAAGTGCACATTTGA 3′

GAS1

5′ CGT CAT TGA GGA CAT GCT GGC TAT 3′

5′ TTC TCC TTG ACC GAC TCG CAG AT 3′

RAB23

5′ GAA AGT AGT AGC CGA AGT GGG AGA T 3′

5′ AGT GCC TCA GCT TCC TCA TTC TT 3′

KIF7

5′ GTC CCA GTG CGA GAT GAA CCT 3′

5′ CGG AGC GTC ACC ACC TTG T 3′

KIF27

5′ AGC TTG CCT GAG TCC TGT TGA GAT TA 3′

5′ GCT TCT CGC AAA TTC ACC ACC TTA 3′

STK36

5′ ACC CCA GAT TGT GAA CGA GCA T 3′

5′ CAT TGT CAC TGT CTG GCT CCT CAT 3′

SUFU

5′ GCT GCT GAC AGA GGA CCC ACA 3′

5′ GTG CAG ACA CCA ACG ATC TGG A 3′

BTRC

5′ GTC TAC GGA CCC TTG TGG AGC AT 3′

5′ GGG CAG CTG GAT CAT TTA GGA AGT 3′

GLI1

5′ CCA ACT CCA CAG GCA TAC AGG AT 3′

5′ CAC AGA TTC AGG CTC ACG CTT C 3′

GLI2

5′ AAG TCA CTC AAG GAT TCC TGC TCA 3′

5′ GTT TTC CAG GAT GGA GCC ACT T 3′

GLI3

5′ CGC GAC TGA ACC CCA TTC TAC 3′

5′ GTG TTG TTG GAC TGT GTG CCA TT 3′

GLI4

5′ CCA TGG GCA TCA ACA TGG CT 3′

5′ TCC TCT ACG TCT TGG AGA TCC AGG T 3′

GLIS2

5′ GTG TCG CTG GGC CAA GTG TAA 3′

5′ CGG GCT TGA CAT GGT AAT CGT T 3′

GLIS1

5′ CCC AGC CCA CAA GGT TAC CA 3′

5′ CAT CCG GTA GCA GTC GCC ATA 3′

MTSS1

5′ CTG CGG CCA GTG ATT GAA GAA 3′

5′ GGG CAG TTT GTG AGG GTC CAT 3′

FOXE1

5′ GCG CTG GGA GCC TGC TAC AA 3′

5′ TGG CGG ACA CGA ACC GAT CTA T 3′

FOXA2

5′ TGG GAG CGG TGA AGA TGG AA 3′

5′ GAG GAG TAG CCC TCG GGC TCT 3′

FOXM1

5′ GGG AGA CCT GTG CAG ATG GTG A 3′

5′ TCG AAG CCA CTG GAT GTT GGA T 3′

SPP1

5′ TCG CAG ACC TGA CAT CCA GTA CC 3′

5′ CCA TTC AAC TCC TCG CTT TCC AT 3′

OSF

5′ GTC CTA ATT CCT GAT TCT GCC AAA 3′

5′ GGG CCA CAA GAT CCG TGA A 3′

IGF2

5′ CGA CCG TGC TTC CGG ACA AC 3′

5′ AGG CGC TGG GTG GAC TGC TT 3′

CCND2

5′ GCT GTC TCT CTG ATC CGC AAG CAT 3′

5′ GGC AAA CTT AAA GTC GGT GGC A 3′

PTHR1

5′ ACA ACA GGA CGT GGG CCA ACT AC 3′

5′ CGG TCA AAC ACC TCC CGT TCA 3′

MKI67

5′ ATT GAA CCT GCG GAA GAG CTG A 3′

5′ GGA GCG CAG GGA TAT TCC CTT A 3′