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Table 2 Gene network.

From: A New Gene Expression Signature for Triple-Negative Breast Cancer using Frozen Fresh Tissue before Neoadjuvant chemotherapy

Feature

FDR

Genes in network

Genes in genome

Phosphatidylcholine biosynthetic process SLC44A4 LPIN1

1.83e-04

5

25

Phosphatidylcholine metabolic process

SLC44A4 LPIN1

8.71e-03

5

60

Organic hydroxy compound biosynthetic process

SLC44A4

LPIN1 GATA3

1.11e-02

6

125

Ethanolamine-containing compound metabolic process

SLC44A4 LPIN1

1.11e-02

5

74

Chromatin FOXC1

GATA3

RARA

AR HMGA1

1.11e-02

7

212

Cellular amine metabolic process

SLC44A4

LPIN1 GATA3

2.87e-02

6

171

Chromatin DNA binding

RARA FOXC1

2.87e-02

3

15

Amine metabolic process

SLC44A4 LPIN1 GATA3

2.87e-02

6

177

Alcohol biosynthetic process

SLC44A4 LPIN1

2.87e-02

5

101

Cellular biogenic amine metabolic process SLC44A4

3.97e-02

5

113

LPIN1

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