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Table 3 Lod scores for markers at or near the COL1A1, COL1A2, and VDR loci

From: Osteopenia in 37 Members of Seven Families: Analysis Based on a Model of Dominant Inheritance

Marker/Family

Lod score at θ =

0.0

0.01

0.05

0.1

0.2

0.3

D17S798

      

1

−0.97

−0.91

−0.69

−0.48

−0.20

−0.07

2

−0.29

−0.29

−0.29

−0.25

−0.13

−0.05

3

Not determined

    

4

−0.72

−0.66

−0.47

−0.30

−0.10

−0.03

5

−0.62

−0.56

−0.39

−0.26

−0.12

−0.05

6

−1.05

−1.00

−0.81

−0.61

−0.30

−0.12

7

−0.25

−0.23

−0.15

−0.07

0.02

0.03

Total

−3.90

−3.65

−2.80

−1.96

−0.84

−0.29

HOX2B

      

1

−0.91

−0.88

−0.75

−0.59

−0.34

−0.15

2

0.17

0.22

0.35

0.43

0.42

0.28

3

−2.01

−1.85

−1.39

−1.02

−0.55

−0.26

4

−0.02

0.00

0.07

0.10

0.10

0.05

5

−0.70

−0.64

−0.45

−0.31

−0.14

−0.07

6

−0.48

−0.44

−0.34

−0.25

−0.14

−0.07

7

−0.34

−0.31

−0.16

0.01

0.17

0.16

Total

−4.28

−3.89

−2.67

−1.63

−0.48

−0.05

D17S806

      

1

−1.50

−1.38

−1.07

−0.80

−0.42

−0.18

2

−0.67

−0.63

−0.47

−0.30

−0.09

−0.02

3

Not determined

    

4

−1.12

−1.01

−0.69

−0.41

−0.12

−0.03

5

−0.02

−0.02

−0.02

−0.01

−0.01

−0.00

6

0.13

0.18

0.28

0.31

0.26

0.14

7

0.12

0.11

0.08

0.06

0.06

0.07

Total

−3.06

−2.76

−1.89

−1.15

−0.32

−0.01

Intron 1 COL1A2

      

1

−0.38

−0.36

−0.29

−0.21

−0.08

−0.01

2

−0.49

−0.47

−0.39

−0.29

−0.16

−0.07

3

−0.01

−0.01

−0.01

−0.01

−0.01

−0.00

4

−0.89

−0.84

−0.69

−0.52

−0.27

−0.10

5

−0.57

−0.51

−0.35

−0.24

−0.11

−0.04

6

−0.99

−0.91

−0.68

−0.47

−0.23

−0.09

7

−0.66

−0.64

−0.58

−0.49

−0.28

−0.12

Total

−3.99

−3.76

−2.99

−2.24

−1.13

−0.44

Intron 12 COL1A2

      

1

−0.21

−0.21

−0.18

−0.15

−0.09

−0.04

2

0.01

0.01

0.02

0.02

0.03

0.04

3

0.85

0.83

0.75

0.65

0.46

0.28

4

−0.88

−0.84

−0.68

−0.53

−0.28

−0.12

5

−0.61

−0.55

−0.39

−0.26

−0.12

−0.05

6

−0.87

−0.80

−0.59

−0.42

−0.21

−0.08

7

−1.55

−1.54

−1.45

−1.19

−0.63

−0.25

Total

−3.26

−3.09

−2.52

−1.86

−0.83

−0.24

D7S558

      

1

Not determined

    

2

0.18

0.19

0.19

0.19

0.14

0.07

3

0.23

0.23

0.21

0.19

0.19

0.14

4

−1.17

−1.10

−0.88

−0.66

−0.35

−0.15

5

Not determined

    

6

Not determined

    

7

Not determined

    

Total

−0.76

−0.69

−0.47

−0.28

−0.08

−0.01

COL2A1

      

1

−0.15

−0.14

−0.09

−0.05

−0.00

−0.03

2

−0.45

−0.44

−0.41

−0.34

−0.20

−0.08

3

−1.35

−1.28

−1.05

−0.81

−0.46

−0.24

4

Not determined

    

5

−0.73

−0.68

−0.50

−0.35

−0.17

−0.07

6

0.79

0.78

0.72

0.63

0.43

0.22

7

−1.52

−1.47

−1.22

−0.92

−0.49

−0.22

Total

−3.40

−3.23

−2.54

−1.83

−0.88

−0.36