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Table 1 Characteristics of the oligonucleotides used.

From: Oligodeoxynucleotides Enhance Lipopolysaccharide-Stimulated Synthesis of Tumor Necrosis Factor: Dependence on Phosphorothioate Modification and Reversal by Heparin

name

Sequence

Number of Mismatches

Number of Phosphorothioate Linkages

Melting Temperature

ODN 7cm

5′-CAT GCT TTC AGT GCT CAT-3′

0

17

56°C

ODN 7pm

5′-CAT GCT TTC AGT GCT CAT-3′

0

4

56°C

ODN 7um

5′-CAT GCT TTC AGT GCT CAT-3′

0

0

56°C

ODN 19cm

5′-TAC TGC AGG ATT CTC TTC-3′

15

17

51°C

  1. Nucleotides on either side of a phosphorothioate linkage are indicated in bold letters. Mismatched nucleotides are in italics. The melting temperatures are estimated by the nearest neighbor method. The G/C content for all four oligonucleotides is 56%. A, adenosine; G, guanosine; C, cytosine; T, thymidine.