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Table 5 Correlation between A roc values and the percentage of peptides containing extended binding motif

From: Methods for Prediction of Peptide Binding to MHC Molecules: A Comparative Study

Method

YK

YKW

BIMAS

SYFPEITHI

ANN

HMM

Correlation coefficient r

0.89

0.90

0.90

0.88

0.84

0.85

r 2

0.79

0.81

0.81

0.77

0.70

0.72