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Table 2 The 20 transcripts displaying the strongest increase in expression in the cell line L1236 compared with GC B cells

From: Profiling of Hodgkin’s Lymphoma Cell Line L1236 and Germinal Center B Cells: Identification of Hodgkin’s Lymphoma-specific Genes

   

n

 

Fold difference

Tag sequence

CB

L1236

Unigene cluster: gene name

74

GTCCCTGCCT

1

74

Hs.301961: glutathione S-transferase

46

AAATGTTTGG

1

46

Hs.9754: ATF-5

38

CCCTGGGTTC

7

266

Hs.111334: ferritin, light polypeptide

36

TACAGCACGG

0

36

Hs.111811: microsomal glutathione S-transferase 3

35

TCACTCCTGG

1

35

Hs.75859: mitochondrial ribosomal protein L49 Hs.9754: ATF-5

30

TGGGGTTCTT

0

30

Hs.272499: alcohol dehydrogenase family member Hs.62954: ferritin, heavy polypeptide 1

26

GAGGCCACCC

0

26

Hs.62919: p21SNFT

20

ACTGCAGCCA

0

20

Hs.22404: protease, serine, 12 Hs.67726: MARCO

18

GTGCCATATT

1

18

Hs.254709: EST Hs.5337: isocitrate dehydrogenase 2

18

TTCTGCTTTC

0

18

Hs.1652: CCR7

18

GATACAGCCA

1

18

Hs.1416: CD23A

18

GCAAACGTTG

0

18

Hs.49768: ESTs

18

TGCAGGCCTG

1

18

Hs.82030: tryptophanyl-tRNA synthetase

17

GCCCCCAATA

1

17

Hs.227751: galectin 1

17

ATAGTAGCTT

0

17

Hs.118400: Fascin

17

GTGACCACGG

1

17

Hs.299882: ESTs, Highly similar to N-methyl-d-aspartate receptor 2C subunit precursor

16

CTCAACCCCC

0

16

Hs.89137: low density lipoprotein related protein 1 Hs.234249: MAPK 8 interacting protein 1

16

CCCCCGTGAA

0

16

Hs.182018: IRAK-1

16

CCTGGAAGAG

1

16

Hs.75655: thyroid hormone binding protein p55

15

TTTTCTGAAA

0

15

Hs.76136: thioredoxin

  1. n indicates the number of times the tag was identified per 30000 tags. The fold difference was calculated as described in Material and Methods. CB, centroblasts.