Table 5 The list of variants localized to genes associated with BMI in ARIC cohort and associated with GWG as shown by fast-BAT
Gene/nearest gene | chr | Localization | # of SNPs | p-value | Top SNP p-value | Top SNP |
|---|---|---|---|---|---|---|
HLD-DQB | 6 | Intergenic | 4654 | 0.016 | 1.02E−06 | rs115258523 |
GATAD2 | 19 | Intron | 1256 | 0.017 | 6.23E−05 | rs145702982 |
AC099791.3 | 1 | Intron | 1800 | 0.020 | 8.85E−05 | rs2485748 |
LINC01141 | 1 | Intron | 1501 | 0.027 | 9.95E−05 | rs12027661 |
HLA-DRB | 6 | Intergenic | 9354 | 0.029 | 1.89E−05 | rs139964305 |
HLA-B | 6 | Stop gained | 4017 | 0.044 | 2.11E−04 | rs149512147 |
LHFPL6 | 13 | Intron | 1648 | 0.047 | 3.34E−06 | rs6563700 |