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Table 6 Molecular docking parameters and results of seven active ingredients in LC binding with PYGM

From: Identification of kukoamine a as an anti-osteoporosis drug target using network pharmacology and experiment verification

Molecule name

Vina scores

Cavity size

Center

Size

   

x

y

z

x

y

z

OIN

 − 7.8

1837

5

23

29

21

21

27

Kukoamine A

− 12.3

1598

31

24

30

36

36

36

Linarin

 − 11.3

1598

31

24

30

24

24

24

Aurantiamide acetate

 − 10.1

1598

31

24

30

29

23

23

Acacetin

 − 10

1598

31

24

30

29

21

21

Apigenin

 − 9.8

1598

31

24

30

29

21

21

Kulactone

 − 8.9

1484

26

3

51

24

24

24

Emodin

 − 8.9

1598

31

24

30

29

19

19

Scopolin

 − 8.6

1598

31

24

30

29

21

21

Physcion

 − 8.6

1598

31

24

30

29

20

20

Stigmasterol

 − 8.5

1484

26

3

51

25

25

25

Lyciumin A

 − 8.4

1484

26

3

51

28

28

28

Hederagenin

 − 8.2

1484

26

3

51

25

25

25

Alexandrin

 − 7.9

1837

5

23

29

29

29

29

Atropine

 − 7.8

1837

5

23

29

21

21

27

Sugiol

 − 7.7

1484

26

3

51

26

29

20

Beta-sitosterol

 − 7.7

1484

26

3

51

23

29

23

Campesterol

 − 7.7

1484

26

3

51

24

24

24

Linoleyl acetate

 − 7

1598

31

24

30

29

29

29

HEPTACOSANE

 − 7

1598

31

24

30

31

31

31

CLR

 − 6.7

1598

31

24

30

36

36

36

Tricosane

 − 6.4

1598

31

24

30

28

28

28