Table 2 The 31 Genes for Which Levels Differed between Early and Advanced HCCs.

8826

200791_s_at

IQGAP1

Hs.1742

IQ motif containing GTPase activating protein 1

15

5538

200975_at

PPT1

Hs.3873

palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile)

1

1075

201487_at

CTSC

Hs.128065

cathepsin C

11

3988

201847_at

LIPA

Hs.85226

lipase A, lysosomal acid, cholesterol esterase (Wolman disease)

10

6643

202114_at

SNX2

Hs.11183

sorting nexin 2

5

5985

203209_at

RFC5

Hs.443227

replication factor C (activator 1) 5, 36.5kDa

12

1536

203923_s_at

CYBB

Hs.88974

cytochrome b-245, β polypeptide (chronic granulomatous disease)

X

8884

204087_s_at

SLC5A6

Hs.435735

solute carrier family 5 (sodium-dependent vitamin transporter), member 6

2

7305

204122_at

TYROBP

Hs.9963

TYRO protein tyrosine kinase binding protein

19

6001

204319_s_at

RGS10

Hs.82280

regulator of G-protein signaling 10

10

23421

205176_s_at

ITGB3BP

Hs.405465

integrin β 3 binding protein (beta3-endonexin)

1

5918

206392_s_at

RARRES1

Hs.82547

retinoic acid receptor responder (tazarotene induced) 1

3

10261

206420_at

IGSF6

Hs.135194

immunoglobulin superfamily, member 6

16

11181

207378_at

TREH

Hs.129712

trehalase (brush-border membrane glycoprotein)

11

5313

207858_s_at

PKLR

Hs.95990

pyruvate kinase, liver and RBC

1

54504

208146_s_at

CPVL

Hs.95594

carboxypeptidase, vitellogenic-like

7

199

209901_x_at

AIF1

Hs.76364

allograft inflammatory factor 1

6

9747

210529_s_at

KIAA0738

Hs.406492

KIAA0738 gene product

7

3382

210547_x_at

ICA1

Hs.380460

islet cell autoantigen 1, 69kDa

7

3113

211991_s_at

HLA-DPA1

Hs.914

major histocompatibility complex, class II, DP α 1

6

997

212540_at

CDC34

Hs.423615

cell division cycle 34

19

3120

212998_x_at

HLA-DQB2

Hs.375115

major histocompatibility complex, class II, DQ β 2

6

811

214315_x_at

CALR

Hs.353170

calreticulin

19

4481

214770_at

MSR1

Hs.436887

macrophage scavenger receptor 1

8

6844

214792_x_at

VAMP2

Hs.25348

vesicle-associated membrane protein 2 (synaptobrevin 2)

17

10113

217861_s_at

PREB

Hs.279784

prolactin regulatory element binding

2

51026

218193_s_at

CGI-141

Hs.62275

CGI-141 protein

12

64077

218523_at

LHPP

Hs.20950

phospholysine phosphohistidine inorganic pyrophosphate phosphatase

10

64757

218865_at

FLJ22390

Hs.195345

hypothetical protein FLJ22390

1

64123

219134_at

ELTD1

Hs.429761

EGF, latrophilin and 7 transmembrane domain containing 1

1

63910

219559_at

C20orf59

Hs.353013

chromosome 20 open reading frame 59

20