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Table 1 Exercise effects on gene expression (selected genes).

From: A Longitudinal, Integrated, Clinical, Histological and mRNA Profiling Study of Resistance Exercise in Myositis

Gene symbol

Gene name

Affymetrix ID

Fold-change

P

Inflammation genes

    

ADAMTS12

ADAM metallopeptidase with thrombospondin type 1 motif, 12

221421_s_at

−1.6

0.037

ADAMTS5

ADAM metallopeptidase with thrombospondin type 1 motif, 5 (aggrecanase-2)

219935_at

−1.5

0.015

C1S

Complement component 1, s subcomponent

208747_s_at

−1.5

0.036

CBL

Cas-Br-M (murine) ecotropic retroviral transforming sequence

225231_at

−1.6

0.003

CBLB

Cas-Br-M (murine) ecotropic retroviral transforming sequence b

233614_at

−1.6

0.022

CCL14

Chemokine (C-C motif) ligand 14

205392_s_at

−2.1

0.022

CCR1

Chemokine (C-C motif) receptor 1

205098_at

−1.8

0.007

CD200

CD200 antigen

209583_s_at

−1.6

0.012

CD226

CD226 antigen

207315_at

1.7

0.042

CD244

CD244 natural killer cell receptor 2B4

234320_at

2.9

0.02

CD44

CD44 antigen (Indian blood group)

1565868_at

−1.6

0.05

CD81

CD81 antigen (target of antiproliferative antibody 1)

200675_at

−1.5

0.02

CHL1

Cell adhesion molecule with homology to L1CAM (close homolog of L1)

204591_at

−1.9

0.017

CHST3

Carbohydrate (chondroitin 6) sulfotransferase 3

209834_at

−1.5

0.031

CLU

Clusterin (complement lysis inhibitor, SP-40,40, sulfated glycoprotein 2, testosterone-repressed prostate message 2, apolipoprotein J)

208791_at

−1.7

0.03

CSF2RB

Colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)

205159_at

−1.6

0.035

DOCK2

Dedicator of cytokinesis 2

213160_at

−2.3

0.013

FOXP3

Forkhead box P3

221334_s_at

2.2

0.033

HDAC2

Histone deacetylase 2

242141_at

−2.4

0.045

HLA-F

Major histocompatibility complex, class I, F

221978_at

−1.6

0.01

IL10RB

Interleukin 10 receptor, beta

209575_at

−1.5

0.007

IL2RG

Interleukin 2 receptor, γ (severe combined immunodeficiency)

204116_at

−1.5

0.027

IRAK3

Interleukin-1 receptor-associated kinase 3

1568830_at

−1.9

0.009

KLF4

Kruppel-like factor 4 (gut)

221841_s_at

−1.8

0.006

LITAF

Lipopolysaccharide-induced TNF factor

200706_s_at

−2.3

0.002

NLK

Nemo-like kinase

238624_at

−2.2

0.018

NPY2R

Neuropeptide Y receptor Y2

210730_s_at

2.1

0.019

OPRK1

Opioid receptor, kappa 1

229944_at

−3.3

0.023

PAG

Phosphoprotein associated with glycosphingolipid microdomains 1

225622_at

−1.5

0.016

PELI2

Pellino homolog 2 (Drosophila)

219132_at

−1.7

0.028

PRTN3

Proteinase 3 (serine proteinase, neutrophil, Wegener granulomatosis autoantigen)

207341_at

2.2

0.01

PTGS1/COX1

Prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)

238669_at

−1.7

0.019

REL

v-rel Reticuloendotheliosis viral oncogene homolog (avian)

206035_at

−1.7

0.035

RFX2

Regulatory factor X, 2 (influences HLA class II expression)

240156_at

−1.7

0.028

RFX3

Regulatory factor X, 3 (influences HLA class II expression)

240867_at

1.7

0.027

RTKN

Rhotekin

225150_s_at

−2.1

0.04

S100A13

S100 calcium binding protein A13

213481_at

−2

0.048

SEMA4D

Sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D

1562250_at

2.4

0.05

TCIRG1

T-cell, immune regulator 1, ATPase, H + transporting, lysosomal V0 protein A3

204158_s_at

−2.3

0.048

TLR8

Toll-like receptor 8

229560_at

−1.5

0.049

VAV1

Vav 1 oncogene

206219_s_at

−3.5

0.031

Fibrosis genes

    

ADAM12

ADAM metallopeptidase domain 12 (meltrin alpha)

226777_at

−3.7

0.004

FBN2

Fibrillin 2 (congenital contractural arachnodactyly)

203184_at

−3.2

0.014

VIM

Vimentin

1555938_x_at

−3.1

0.045

MGP

Matrix Gla protein

238481_at

−2.6

0.012

HGF

Hepatocyte growth factor (hepapoietin A; scatter factor)

210755_at

−2.3

0.045

EDIL3

EGF-like repeats and discoidin I-like domains 3

225275_at

−2.3

0.01

COMP

Cartilage oligomeric matrix protein

205713_s_at

−2.1

0.049

CHRD

Chordin

211248_s_at

−2.1

0.029

CALCRL

Calcitonin receptor-like

234996_at

−2

0.004

FGF1

Fibroblast growth factor 1 (acidic)

205117_at

−2

0.016

COL14A1

Collagen, type XIV, α 1 (undulin)

212865_s_at

−1.8

0.031

COL1A1

Collagen, type I, α 1

1556499_s_at

−1.7

0.04

PLOD2

Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2

202620_s_at

−1.7

0.04

MAOA

Monoamine oxidase A

212741_at

−1.6

0.022

LRRFIP1

Leucine rich repeat (in FLII) interacting protein 1

227391_x_at

−1.6

0.001

NCAM1

Neural cell adhesion molecule 1

212843_at

−1.6

0.034

LOXL1

Lysyl oxidase-like 1

203570_at

−1.6

0.045

CSPG2

Chondroitin sulfate proteoglycan 2 (versican)

204619_s_at

−1.6

0.015

CTGF

Connective tissue growth factor

209101_at

−1.6

0.022

NID

Nidogen 1

202007_at

−1.5

0.021

COL5A2

Collagen, type V, α 2

221729_at

−1.5

0.046

MFAP4

Microfbrillar-associated protein 4

212713_at

−1.5

0.022

LTBP1

Latent transforming growth factor β binding protein 1

1566267_at

1.5

0.034

PREP

Prolyl endopeptidase

229644_at

1.7

0.038

MMP16

Matrix metallopeptidase 16 (membrane-inserted)

208166_at

2.7

0.041

Metabolism genes

    

ALDH1L1

Aldehyde dehydrogenase 1 family member L1

1559766_at

−2.6

0.008

AK3

Adenylate kinase 3-like 1

230630_at

−2.3

0.039

ACACA

Acetyl-coenzyme A carboxylase alpha

212186_at

−1.5

0.046

ATP2C1

ATPase, Ca ++ transporting, type 2C, member 1

209935_at

−1.5

0.02

UCP3

Uncoupling protein 3 (mitochondrial, proton carrier)

219827_at

1.6

0.005

UQCRC2

Ubiquinol-cytochrome c reductase core protein II

239465_at

1.6

0.039

ATP1B2

ATPase, Na+/K+ transporting, β2 polypeptide

204311_at

1.8

0.025