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Table 1 DNAzyme target site, arm length, sequences and activity in tube formation assays.

From: Antiangiogenic and Antitumoral Effects Mediated by a Vascular Endothelial Growth Factor Receptor 1 (VEGFR-1)-Targeted DNAzyme

DNAzymes

Target sites

Arms

Sequence (5′ to 3′)a

Activityb

DT10

250

9/7

AGCTGACCAGGCTAGCTACAACGAGGTGAGC

+

DT11

353

9/7

CCTTTTAAAGGCTAGCTACAACGATCAGTTC

−

DT12

843

8/9

TCTTTGTAGGCTAGCTACAACGAGTTGCATTT

+

DT13

943

8/5

TATTTGGAGGCTAGCTACAACGAATCTA

−

DT14

1324

7/6

GCCTTCAGGCTAGCTACAACGATTTCAT

+

DT15

1592

7/7

TTGTCTGGGCTAGCTACAACGATGCCCAG

+

DT16

1753

9/9

TGCTCTCAAGGCTAGCTACAACGATCTGTTTCC

−

DT17

1910

6/6

GGCACAGGCTAGCTACAACGACTGTGA

+

DT18

2098

7/5

AGAGTGAGGCTAGCTACAACGAGGAGT

+ +

DT19

2161

7/6

TTCCTGGGGCTAGCTACAACGATCTGCA

+

DT20

2323

9/7

ACCAAGTGAGGCTAGCTACAACGACTGAGGC

−

  1. aDNAzymes were constructed with either symmetric or asymmetric arms depending on the length of the consensus sequence and free energy; the catalytic core sequence was underlined.
  2. bThe activity was assessed based on no disruption (−), partial disruption (+) and complete disruption (++) of the tube structures in the Matrigel assay.