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Table 3 piRNAs differential expression by small RNA deep sequencing: metastatic versus localized ccRCC.a

From: Piwi-Interacting RNAs (piRNAs) Are Dysregulated in Renal Cell Carcinoma and Associated with Tumor Metastasis and Cancer-Specific Survival

piRNA ID

fRNAdb ID

L (Ave)

M (Ave)

Log2 ratio

P

FDR

piR-42144

FR271551I DQ581033

0.06

31.17

8.67

2.42E-05

0.0037

piR-44785

FR012473I DQ583674

0.03

2.07

6.02

0.0040

0.0908

piR-59056

R222326I DQ597945

0.38

18.56

5.74

0.0002

0.0112

piR-59101

FR230731I DQ597990

0.56

16.44

5.56

7.48E-05

0.0063

piR-60029

FR140858I DQ598918

0.03

1.59

5.37

0.0046

0.0941

piR-50403

FR374932I DQ589292

0.27

4.07

4.65

0.0030

0.0734

piR-32079

FR240375I DQ570968

10.71

146.73

4.47

6.32E-07

0.0006

piR-41965

FR259053I DQ580854

5.42

75.34

4.43

8.16E-06

0.0026

piR-57010

FR381169I DQ595899

0.45

7.25

3.91

0.0007

0.0303

piR-75530

FR051200I DQ614419

21.20

185.30

3.65

7.94E-06

0.0026

piR-34463

FR008504I DQ573352

6.40

56.98

3.55

1.49E-05

0.0035

piR-9540

FR183841I DQ548429

7.75

55.99

3.55

9.25E-05

0.0063

piR-37891

FR023255I DQ576780

7.03

54.95

3.53

0.0002

0.0112

piR-9541

FR145409I DQ548430

8.54

61.79

3.51

9.51E-05

0.0063

piR-2099

FR270793I DQ540988

16.27

120.73

3.37

2.84E-05

0.0037

piR-19514

FR197620I DQ558403

12.33

79.67

3.29

0.0001

0.0085

piR-58029

FR288759I DQ596918

46.28

306.41

3.22

2.48E-05

0.0037

piR-52354

FR114547I DQ591243

48.82

302.85

3.10

3.94E-05

0.0040

piR-52355

FR068012I DQ591244

49.93

304.61

3.07

4.47E-05

0.0041

piR-39894

FR329966I DQ578783

57.78

324.96

3.06

8.19E-05

0.0063

piR-54782

FR145575I DQ593671

11.47

59.38

2.92

0.0025

0.0647

piR-32444

FR341794I DQ571333

9.97

54.20

2.89

0.0004

0.0198

piR-57855

FR271147I DQ596744

9.24

47.23

2.79

0.0007

0.0302

piR-58593

FR035643I DQ597482

10.47

46.72

2.79

0.0048

0.0959

piR-1170

FR002163I DQ540059

4.95

23.19

2.73

0.0012

0.0477

piR-57916

FR111727I DQ596805

31.38

134.02

2.67

0.0025

0.0649

piR-56650

FR219510I DQ595539

12.65

51.67

2.67

0.0017

0.0553

piR-58508

FR205116I DQ597397

7.70

46.88

2.66

0.0007

0.0302

piR-1514

FR086322I DQ540403

1042.43

4095.00

2.65

0.0015

0.0509

piR-4018

FR007806I DQ542907

6.67

32.63

2.64

0.0028

0.0713

piR-43607

FR138938I DQ582496

134.43

525.55

2.63

0.0019

0.0569

piR-59374

FR276112I DQ598263

84.58

419.95

2.61

3.25E-05

0.0037

piR-1037

FR325161I DQ539926

5.71

24.35

2.60

0.0018

0.0567

piR-57649

FR252389I DQ596538

11.56

54.73

2.60

0.0010

0.0300

piR-75191

FR279346I DQ614080

73.35

351.67

2.56

0.0043

0.0908

piR-82944

FR370156I DQ621833

498.41

1865.53

2.53

0.0020

0.0569

piR-58507

FR331389I DQ597396

7.03

38.70

2.49

0.0014

0.0507

piR-32934

FR163506I DQ571823

17.83

67.05

2.47

0.0029

0.0732

piR-31923

FR134050I DQ570812

17.75

77.92

2.46

0.0014

0.0507

piR-32051

FR383421I DQ570940

171.04

589.06

2.42

0.0037

0.0859

piR-59127

FR092662I DQ598016

31.24

161.07

2.25

0.0035

0.0821

piR-72436

FR198023I DQ611325

1165.30

7394.72

2.18

0.0018

0.0558

piR-54043

FR283482I DQ592932

77.64

261.96

2.09

0.0043

0.0908

piR-2329

FR080741I DQ541218

1502.17

4441.62

1.75

0.0043

0.0908

piR-51518

FR022075I DQ590407

37.59

6.66

−2.20

0.0003

0.0143

piR-46515

FR270274I DQ585404

2.68

0.01

−6.13

0.002438

0.0649

  1. Ave, normalized average piRNA counts.
  2. aBold piRNAs are discussed in detail in the text.